AlphaFind 2.0 Search Demo

The main goal of the AlphaFind 2.0 version is to work with the pLDDT and PAE metrics through identifying stable regions in the protein.

Available proteins

# Protein ID Protein name PDB File Size Number of Regions
1 A4D2B0 Metallo-beta-lactamase domain-containing protein 1 0.15 MB 1
2 Q96PL5 Erythroid membrane-associated protein 0.29 MB 2
3 P02671 Fibrinogen alpha chain 0.52 MB 3
4 P06315 Immunoglobulin kappa variable 5-2 0.07 MB 1
5 Q13367 AP-3 complex subunit beta-2 0.66 MB 3
6 Q96SL4 Glutathione peroxidase 7 0.12 MB 1
7 Q8N6M3 Acyl-coenzyme A diphosphatase FITM2 0.17 MB 1
8 Q9BW27 Nuclear pore complex protein Nup85 0.41 MB 2
9 Q8TDM0 Breast carcinoma-amplified sequence 4 0.13 MB 1
10 Q92902 BLOC-3 complex member HPS1 0.44 MB 2
11 Q9FFD0 Auxin efflux carrier component 5 0.22 MB 1
12 O14894 Transmembrane 4 L6 family member 5 0.12 MB 1
13 Q8N9T8 Protein KRI1 homolog 0.46 MB 12
14 O75437 Zinc finger protein 254 0.43 MB 5
15 Q6DCA0 AMMECR1-like protein 0.19 MB 1
16 P19532 Transcription factor E3 0.34 MB 3
17 Q96A25 Transmembrane protein 106A 0.16 MB 1
18 P02655 Apolipoprotein C-II 0.07 MB 2
19 Q15041 ADP-ribosylation factor-like protein 6-interacting protein 1 0.13 MB 2
20 P31323 cAMP-dependent protein kinase type II-beta regulatory subunit 0.26 MB 4
21 A1L162 Glutamate-rich protein 2 0.10 MB 1
22 Q7Z6W1 Transmembrane and coiled-coil domain-containing protein 2 0.11 MB 2
23 Q494V2 Cilia- and flagella-associated protein 100 0.39 MB 5
24 P0DP57 Secreted Ly-6/uPAR domain-containing protein 2 0.06 MB 2
25 Q9BTN0 Leucine-rich repeat and fibronectin type-III domain-containing protein 3 0.37 MB 4
26 Q9C6B8 Auxin efflux carrier component 1 0.37 MB 1
27 Q9HAT0 Ropporin-1A 0.13 MB 2
28 Q9UP52 Transferrin receptor protein 2 0.49 MB 2
29 Q9UJX0 Oxidative stress-induced growth inhibitor 1 0.29 MB 1
30 A4D126 D-ribitol-5-phosphate cytidylyltransferase 0.28 MB 1
31 A6NE52 WD repeat-containing protein 97 0.99 MB 6
32 Q99622 Protein C10 0.08 MB 1
33 Q8NGZ9 Olfactory receptor 2T10 0.20 MB 3
34 Q8NG84 Olfactory receptor 2AK2 0.21 MB 1
35 Q9BQ95 Evolutionarily conserved signaling intermediate in Toll pathway, mitochondrial 0.27 MB 2
36 E9PGG2 Anomalous homeobox protein 0.23 MB 1
37 Q12797 Aspartyl/asparaginyl beta-hydroxylase 0.48 MB 2
38 A6NM03 Olfactory receptor 2AG2 0.20 MB 2
39 Q05193 Dynamin-1 0.54 MB 4
40 P49918 Cyclin-dependent kinase inhibitor 1C 0.18 MB 2
41 O15068 Guanine nucleotide exchange factor DBS 0.71 MB 4
42 Q9UHE5 N-acetyltransferase 8 0.14 MB 1
43 Q9BUJ2 Heterogeneous nuclear ribonucleoprotein U-like protein 1 0.53 MB 1
44 O75122 CLIP-associating protein 2 0.78 MB 4
45 Q86XE3 Calcium uptake protein 3, mitochondrial 0.34 MB 2
46 Q9LFP6 Auxin efflux carrier component 8 0.23 MB 1
47 Q6NUM6 S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1B 0.43 MB 3
48 Q8IZD6 Solute carrier family 22 member 15 0.34 MB 2
49 O15162 Phospholipid scramblase 1 0.20 MB 1
50 Q9UK76 Jupiter microtubule associated homolog 1 0.09 MB 1
51 Q12980 GATOR1 complex protein NPRL3 0.35 MB 8
52 Q06203 Amidophosphoribosyltransferase 0.32 MB 1
53 Q96BY2 Modulator of apoptosis 1 0.22 MB 3
54 Q3SY89 Q3SY89 0.33 MB 3
55 P01860 Immunoglobulin heavy constant gamma 3 0.23 MB 2
56 Q9Y2R5 Small ribosomal subunit protein uS17m 0.08 MB 2
57 O00628 Peroxisomal targeting signal 2 receptor 0.20 MB 1
58 Q0VAA5 PI-PLC X domain-containing protein 2 0.20 MB 2
59 P28360 Homeobox protein MSX-1 0.18 MB 1
60 Q5BVD1 TPA-induced transmembrane protein 0.14 MB 1
61 P20815 Cytochrome P450 3A5 0.32 MB 2
62 Q86WB7 Protein unc-93 homolog A 0.28 MB 2
63 Q9NUD7 Uncharacterized protein C20orf96 0.24 MB 1
64 O75264 Small integral membrane protein 24 0.09 MB 2
65 P69905 Hemoglobin subunit alpha 0.09 MB 1
66 Q8WWR8 Sialidase-4 0.29 MB 1
67 P20719 Homeobox protein Hox-A5 0.16 MB 2
68 P10515 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial 0.38 MB 4
69 Q6N075 Molybdate-anion transporter 0.28 MB 1
70 O75113 NEDD4-binding protein 1 0.55 MB 4
71 Q9HBF4 Zinc finger FYVE domain-containing protein 1 0.48 MB 6
72 O14737 Programmed cell death protein 5 0.08 MB 2
73 Q940Y5 Auxin efflux carrier component 7 0.37 MB 1
74 A0A087X0M5 T cell receptor beta variable 18 0.07 MB 1
75 Q16799 Reticulon-1 0.46 MB 4
76 Q5JTZ9 Alanine--tRNA ligase, mitochondrial 0.59 MB 4
77 O22267 Histidine kinase CKI1 0.69 MB 6
78 Q2NL98 Vimentin-type intermediate filament-associated coiled-coil protein 0.10 MB 1
79 O75608 Acyl-protein thioesterase 1 0.14 MB 1
80 Q8TAP8 Protein phosphatase 1 regulatory subunit 35 0.16 MB 3
81 Q15067 Peroxisomal acyl-coenzyme A oxidase 1 0.41 MB 1
82 Q8NGN4 Olfactory receptor 10G9 0.19 MB 2
83 Q9BY60 Gamma-aminobutyric acid receptor-associated protein-like 3 0.08 MB 1
84 Q9P217 Zinc finger SWIM domain-containing protein 5 0.72 MB 4
85 Q13530 Serine incorporator 3 0.29 MB 1
86 O00222 Metabotropic glutamate receptor 8 0.56 MB 2
87 Q9Y232 Chromodomain Y-like protein 0.37 MB 2
88 Q16553 Lymphocyte antigen 6E 0.08 MB 3
89 Q9BYV1 Alanine--glyoxylate aminotransferase 2, mitochondrial 0.32 MB 1
90 P55771 Paired box protein Pax-9 0.20 MB 1
91 Q9NSB4 Keratin, type II cuticular Hb2 0.31 MB 3
92 Q86UK5 Limbin 0.81 MB 8
93 Q9UBU8 Mortality factor 4-like protein 1 0.23 MB 2
94 O75165 DnaJ homolog subfamily C member 13 1.40 MB 11
95 A8MXV4 Acyl-coenzyme A diphosphatase NUDT19 0.24 MB 1
96 Q9GZP1 Neurensin-2 0.12 MB 1
97 P19961 Alpha-amylase 2B 0.32 MB 1
98 Q8TF01 Arginine/serine-rich protein PNISR 0.51 MB 4
99 O14950 Myosin regulatory light chain 12B 0.11 MB 2
100 Q9NR46 Endophilin-B2 0.25 MB 2
101 Q9S7Z8 Auxin efflux carrier component 3 0.39 MB 1
102 Q9H4I0 Double-strand-break repair protein rad21-like protein 1 0.35 MB 4
103 Q7KYR7 Butyrophilin subfamily 2 member A1 0.33 MB 3
104 Q8IXT1 DNA damage-induced apoptosis suppressor protein 0.62 MB 1
105 A0A0J9YXY3 T cell receptor beta variable 6-2 0.07 MB 1
106 Q9UBD5 Origin recognition complex subunit 3 0.45 MB 6
107 P62805 Histone H4 0.07 MB 1
108 Q5VT40 Protein FAM78B 0.17 MB 1